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  5. Solyc10g006480.2.1

Solyc10g006480.2.1


Description : ubiquitin-fold protein (UBQ)


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree ,
OG_06_0000425 (SeedPlants) Phylogenetic Tree(s): OG_06_0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006480.2.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
MA_454078g0010 No alias Polyubiquitin (Fragment) OS=Hordeum vulgare... 0.02 Archaeplastida
Pp3c18_2510V3.1 No alias ubiquitin 4 0.02 Archaeplastida
Pp3c3_26770V3.1 No alias polyubiquitin 10 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 383 454
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 307 378
No external refs found!