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  5. AMTR_s00030p00146410

AMTR_s00030p00146410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.93

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00146410
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00024p00250970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00145p00098450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.05 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT1G74430 ATMYBCP66, MYB95, ATMYB95 myb domain protein 95 0.06 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.04 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.03 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.05 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.04 Archaeplastida
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.05 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.02 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01015574001 No alias Transcription factor MYB82 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032467001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_20309 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22064 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_40065 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g26130.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g01960.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10431610g0040 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139238g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_140579g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_179894g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_8464929g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_926162g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp3g05910.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Smo80553 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g053610.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054980.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e002919_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e036684_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041551_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041553_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!