1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g006540.4.1

Solyc10g006540.4.1


Description : group-I formin actin filament elongation factor


Gene families : OG0000460 (Archaeplastida) Phylogenetic Tree(s): OG0000460_tree ,
OG_05_0000315 (LandPlants) Phylogenetic Tree(s): OG_05_0000315_tree ,
OG_06_0000245 (SeedPlants) Phylogenetic Tree(s): OG_06_0000245_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g006540.4.1
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AT1G24150 FH4, ATFH4 formin homologue 4 0.07 Archaeplastida
AT1G59910 No alias Actin-binding FH2 (formin homology 2) family protein 0.11 Archaeplastida
GSVIVT01011372001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
GSVIVT01014581001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
GSVIVT01020145001 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
LOC_Os02g50570.1 No alias group-I formin actin filament elongation factor 0.06 Archaeplastida
LOC_Os04g01070.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
LOC_Os07g39920.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
MA_10431423g0010 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Mp5g03400.1 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Pp3c18_4770V3.1 No alias Actin-binding FH2 (formin homology 2) family protein 0.02 Archaeplastida
Smo103199 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
Solyc07g064010.3.1 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Zm00001e004448_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013697_P001 No alias group-I formin actin filament elongation factor 0.01 Archaeplastida
Zm00001e015771_P001 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015425 FH2_Formin 452 855
No external refs found!