1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g007450.2.1

Solyc10g007450.2.1


Description : Protein trichome birefringence-like 42 OS=Arabidopsis thaliana (sp|q9zv89|tbl42_arath : 409.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g007450.2.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00023p00040670 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 33 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00114p00046060 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G29050 TBL38 TRICHOME BIREFRINGENCE-LIKE 38 0.04 Archaeplastida
AT2G30900 TBL43 TRICHOME BIREFRINGENCE-LIKE 43 0.03 Archaeplastida
AT2G31110 TBL40 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
GSVIVT01000843001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020678001 No alias Protein trichome birefringence-like 39 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01020682001 No alias Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035039001 No alias Protein trichome birefringence-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_10738 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_12862 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g30970.1 No alias Protein trichome birefringence-like 8 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os06g10560.1 No alias Protein trichome birefringence-like 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g34060.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
MA_10436708g0010 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 Archaeplastida
MA_5701g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.04 Archaeplastida
Solyc01g068420.4.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g050920.4.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc09g005630.3.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc10g076570.2.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc12g014360.2.1 No alias Protein trichome birefringence-like 41 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e038413_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e038414_P003 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e039345_P001 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.01 Archaeplastida
Zm00001e041204_P001 No alias Protein trichome birefringence-like 2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 31 83
IPR026057 PC-Esterase 84 348
No external refs found!