Solyc10g008220.4.1


Description : Putative late blight resistance protein homolog R1A-6 OS=Solanum demissum (sp|q6l438|r1a6_solde : 298.0)


Gene families : OG0010368 (Archaeplastida) Phylogenetic Tree(s): OG0010368_tree ,
OG_05_0010352 (LandPlants) Phylogenetic Tree(s): OG_05_0010352_tree ,
OG_06_0009271 (SeedPlants) Phylogenetic Tree(s): OG_06_0009271_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g008220.4.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Solyc03g005660.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g007030.4.1 No alias Putative late blight resistance protein homolog R1B-14... 0.03 Archaeplastida
Solyc04g007050.4.1 No alias Putative late blight resistance protein homolog R1B-14... 0.04 Archaeplastida
Solyc04g007060.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g007070.3.1 No alias Putative late blight resistance protein homolog R1B-14... 0.02 Archaeplastida
Solyc04g015210.4.1 No alias Putative late blight resistance protein homolog R1B-17... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 198 325
IPR002182 NB-ARC 162 196
No external refs found!