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  5. Solyc10g008300.3.1

Solyc10g008300.3.1


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0002581 (SeedPlants) Phylogenetic Tree(s): OG_06_0002581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g008300.3.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT1G02310 MAN1 Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
GSVIVT01018923001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037215001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.05 Archaeplastida
Gb_04673 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_08848 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_18866 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_18867 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_23961 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
LOC_Os05g25480.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Pp3c13_12000V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.06 Archaeplastida
Smo234867 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 85 387
No external refs found!