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Description : SYP1-group Qa-type SNARE component
Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0009051 (SeedPlants) Phylogenetic Tree(s): OG_06_0009051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc10g008570.3.1 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G61290 | ATSYP124, SYP124 | syntaxin of plants 124 | 0.04 | Archaeplastida | |
| AT3G03800 | ATSYP131, SYP131 | syntaxin of plants 131 | 0.05 | Archaeplastida | |
| GSVIVT01006716001 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.03 | Archaeplastida | |
| GSVIVT01030578001 | No alias | Vesicle trafficking.SNARE target membrane recognition... | 0.03 | Archaeplastida | |
| MA_6119g0010 | No alias | Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... | 0.03 | Archaeplastida | |
| Mp2g19600.1 | No alias | SYP1-group Qa-type SNARE component | 0.01 | Archaeplastida | |
| Pp3c14_10430V3.1 | No alias | syntaxin of plants 124 | 0.02 | Archaeplastida | |
| Solyc07g052470.3.1 | No alias | SYP1-group Qa-type SNARE component | 0.02 | Archaeplastida | |
| Solyc12g005580.2.1 | No alias | SYP1-group Qa-type SNARE component | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Neighborhood |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Neighborhood |
| MF | GO:0030570 | pectate lyase activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 600 | 626 |
| IPR002885 | Pentatricopeptide_repeat | 768 | 789 |
| IPR002885 | Pentatricopeptide_repeat | 496 | 521 |
| IPR002885 | Pentatricopeptide_repeat | 422 | 470 |
| IPR002885 | Pentatricopeptide_repeat | 694 | 740 |
| IPR002885 | Pentatricopeptide_repeat | 523 | 571 |
| IPR006011 | Syntaxin_N | 41 | 246 |
| IPR000727 | T_SNARE_dom | 248 | 296 |
| No external refs found! |