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  5. Solyc10g009020.3.1

Solyc10g009020.3.1


Description : RING-HC-class E3 ligase


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0001068 (LandPlants) Phylogenetic Tree(s): OG_05_0001068_tree ,
OG_06_0000881 (SeedPlants) Phylogenetic Tree(s): OG_06_0000881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g009020.3.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT5G01520 No alias RING/U-box superfamily protein 0.04 Archaeplastida
LOC_Os01g67850.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
LOC_Os04g58320.2 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e004460_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Zm00001e018924_P001 No alias RING-HC-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!