Solyc10g009080.4.1


Description : no hits & (original description: none)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g009080.4.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.06 Archaeplastida
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.06 Archaeplastida
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.06 Archaeplastida
AT1G27360 SPL11 squamosa promoter-like 11 0.03 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.04 Archaeplastida
AT1G53160 SPL4 squamosa promoter binding protein-like 4 0.02 Archaeplastida
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.04 Archaeplastida
AT3G15270 SPL5 squamosa promoter binding protein-like 5 0.04 Archaeplastida
Cre07.g325738 No alias RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
GSVIVT01003836001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01021087001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
Gb_02576 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_03920 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_37539 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_38013 No alias transcription factor (SBP) 0.04 Archaeplastida
Gb_38014 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os04g46580.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os04g56170.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os06g44860.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os06g49010.4 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os08g39890.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os08g41940.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_10429891g0010 No alias transcription factor (SBP) 0.04 Archaeplastida
MA_15381g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_22749g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_92489g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.06 Archaeplastida
Pp3c4_6000V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Smo79699 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Zm00001e006686_P001 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e013761_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e013795_P002 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e021962_P003 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e021967_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025110_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e028442_P002 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e030416_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e034537_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e035060_P002 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e036452_P001 No alias Squamosa promoter-binding-like protein 15 OS=Oryza... 0.02 Archaeplastida
Zm00001e037693_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e041526_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!