Solyc10g009360.4.1

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0015187 (SeedPlants) Phylogenetic Tree(s): OG_06_0015187_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g009360.4.1
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AT1G07640	OBP2	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT1G21340	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT1G69570	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.03	Archaeplastida
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.08	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
GSVIVT01002242001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.08	Archaeplastida
GSVIVT01008156001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01021085001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.02	Archaeplastida
Gb_23562	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g47810.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os08g38220.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os10g35300.2	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
MA_123810g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_16692g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.05	Archaeplastida
Smo29617	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Solyc02g090220.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc03g082840.3.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
Solyc03g121400.1.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc04g070960.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g071480.3.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc11g066050.1.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc11g072500.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.09	Archaeplastida
Zm00001e006527_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e015701_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e018163_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e028042_P002	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e028672_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e038479_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006950	response to stress	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	45	102

External Links

No external refs found!

Solyc10g009360.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation