1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g017550.4.1

Solyc10g017550.4.1


Description : actin-depolymerizing factor


Gene families : OG0000480 (Archaeplastida) Phylogenetic Tree(s): OG0000480_tree ,
OG_05_0000447 (LandPlants) Phylogenetic Tree(s): OG_05_0000447_tree ,
OG_06_0088484 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g017550.4.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00214610 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
AMTR_s00140p00036970 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
AT1G01750 ADF11 actin depolymerizing factor 11 0.04 Archaeplastida
AT4G00680 ADF8 actin depolymerizing factor 8 0.04 Archaeplastida
AT4G25590 ADF7 actin depolymerizing factor 7 0.05 Archaeplastida
AT4G34970 ADF9 actin depolymerizing factor 9 0.03 Archaeplastida
AT5G52360 ADF10 actin depolymerizing factor 10 0.06 Archaeplastida
GSVIVT01016593001 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
GSVIVT01025018001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
GSVIVT01025525001 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
GSVIVT01026879001 No alias Cytoskeleton.microfilament network.actin... 0.09 Archaeplastida
GSVIVT01027807001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
GSVIVT01028963001 No alias Cytoskeleton.microfilament network.actin... 0.1 Archaeplastida
Gb_36582 No alias actin-depolymerizing factor 0.02 Archaeplastida
LOC_Os02g44470.1 No alias actin-depolymerizing factor 0.09 Archaeplastida
LOC_Os03g13950.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
LOC_Os04g46910.1 No alias actin-depolymerizing factor 0.09 Archaeplastida
LOC_Os07g30090.2 No alias actin-depolymerizing factor 0.07 Archaeplastida
MA_10433573g0020 No alias actin-depolymerizing factor 0.02 Archaeplastida
Mp1g17660.1 No alias actin-depolymerizing factor 0.04 Archaeplastida
Mp2g12970.1 No alias actin-depolymerizing factor 0.02 Archaeplastida
Mp3g20570.1 No alias actin-depolymerizing factor 0.02 Archaeplastida
Solyc03g025750.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g072590.3.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Zm00001e007293_P001 No alias actin-depolymerizing factor 0.03 Archaeplastida
Zm00001e010368_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e011754_P001 No alias actin-depolymerizing factor 0.02 Archaeplastida
Zm00001e015357_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e023183_P001 No alias actin-depolymerizing factor 0.08 Archaeplastida
Zm00001e034985_P001 No alias actin-depolymerizing factor 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002108 ADF-H 14 134
No external refs found!