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  5. Solyc10g017640.1.1

Solyc10g017640.1.1


Description : transcription factor (MADS/AGL)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g017640.1.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT2G14210 ANR1, AGL44 AGAMOUS-like 44 0.03 Archaeplastida
MA_18048g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_45349g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e012026_P002 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e015924_P003 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e018811_P001 No alias transcription factor (MADS/AGL) 0.07 Archaeplastida
Zm00001e023825_P002 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e029170_P001 No alias transcription factor (MADS/AGL) 0.07 Archaeplastida
Zm00001e035509_P002 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e038096_P002 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!