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  5. Solyc10g017725.1.1

Solyc10g017725.1.1


Description : no hits & (original description: none)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g017725.1.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Solyc01g057523.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.05 Archaeplastida
Solyc02g005608.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc03g077985.1.1 No alias No annotation 0.05 Archaeplastida
Solyc03g093777.1.1 No alias No annotation 0.07 Archaeplastida
Solyc04g050955.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc05g018435.1.1 No alias No annotation 0.08 Archaeplastida
Solyc08g014455.1.1 No alias No annotation 0.04 Archaeplastida
Solyc08g041825.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc09g059105.1.1 No alias No annotation 0.05 Archaeplastida
Solyc09g059157.1.1 No alias No annotation 0.06 Archaeplastida
Solyc10g150126.1.1 No alias No annotation 0.07 Archaeplastida
Solyc12g036475.1.1 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!