Solyc10g024420.3.1

Description : subfamily ABCC transporter

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000437 (LandPlants) Phylogenetic Tree(s): OG_05_0000437_tree ,
OG_06_0000372 (SeedPlants) Phylogenetic Tree(s): OG_06_0000372_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g024420.3.1
Cluster	HCCA: Cluster_178

Target	Alias	Description	ECC score	Gene Family Method
AT1G30420	ATMRP12, MRP12, ABCC11	multidrug resistance-associated protein 12	0.04	Archaeplastida
AT3G13080	ABCC3, ATMRP3, MRP3	multidrug resistance-associated protein 3	0.02	Archaeplastida
AT3G21250	MRP6, ATMRP6, ABCC8	multidrug resistance-associated protein 6	0.01	Archaeplastida
AT3G60160	MRP9, ABCC9, ATMRP9	multidrug resistance-associated protein 9	0.04	Archaeplastida
Cpa\|evm.model.tig00000718.1	No alias	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cpa\|evm.model.tig00001024.2	No alias	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cpa\|evm.model.tig00020553.190	No alias	ABC transporter C family member 4 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cpa\|evm.model.tig00020592.4	No alias	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre02.g103250	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Cre17.g734612	No alias	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01016880001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01019469001	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Gb_36600	No alias	subfamily ABCC transporter	0.03	Archaeplastida
LOC_Os01g07870.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
LOC_Os01g25386.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
LOC_Os04g13210.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
LOC_Os06g06440.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
LOC_Os11g05700.1	No alias	subfamily ABCC transporter	0.05	Archaeplastida
MA_10436190g0030	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.03	Archaeplastida
MA_138036g0010	No alias	subfamily ABCC transporter	0.03	Archaeplastida
MA_602830g0010	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.02	Archaeplastida
MA_629244g0010	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Mp4g11790.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Mp5g13190.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Pp3c13_19960V3.1	No alias	multidrug resistance-associated protein 5	0.02	Archaeplastida
Pp3c1_20660V3.1	No alias	multidrug resistance-associated protein 14	0.03	Archaeplastida
Pp3c7_2500V3.1	No alias	multidrug resistance-associated protein 10	0.02	Archaeplastida
Pp3c8_18670V3.1	No alias	multidrug resistance-associated protein 10	0.02	Archaeplastida
Smo171469	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo267218	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo409191	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc07g065320.4.1	No alias	subfamily ABCC transporter	0.05	Archaeplastida
Solyc09g075020.3.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Zm00001e007114_P002	No alias	subfamily ABCC transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Neighborhood
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004357	glutamate-cysteine ligase activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006551	leucine metabolic process	IEP	Neighborhood
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009098	leucine biosynthetic process	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	1210	1357
IPR011527	ABC1_TM_dom	294	504
IPR011527	ABC1_TM_dom	886	1120
IPR003439	ABC_transporter-like	582	716

External Links

No external refs found!

Solyc10g024420.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation