1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g037930.2.1

Solyc10g037930.2.1


Description : Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana (sp|q8rwd5|scd2_arath : 135.0)


Gene families : OG0002146 (Archaeplastida) Phylogenetic Tree(s): OG0002146_tree ,
OG_05_0002138 (LandPlants) Phylogenetic Tree(s): OG_05_0002138_tree ,
OG_06_0002837 (SeedPlants) Phylogenetic Tree(s): OG_06_0002837_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g037930.2.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT4G08630 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 Archaeplastida
GSVIVT01004935001 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.03 Archaeplastida
LOC_Os05g05580.1 No alias SCD2 component of post-Golgi trafficking SCD complex 0.03 Archaeplastida
Zm00001e021513_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e040420_P004 No alias SCD2 component of post-Golgi trafficking SCD complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!