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  5. Solyc10g047590.3.1

Solyc10g047590.3.1


Description : Polygalacturonase OS=Gossypium hirsutum (sp|q39786|pglr_goshi : 288.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 233.3)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g047590.3.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020794001 No alias Polygalacturonase OS=Nicotiana tabacum 0.06 Archaeplastida
LOC_Os06g35320.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida
Solyc10g047570.2.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.06 Archaeplastida
Zm00001e030526_P001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 54 371
No external refs found!