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  5. Solyc10g048040.1.1

Solyc10g048040.1.1


Description : Pathogenesis-related protein 1B OS=Nicotiana tabacum (sp|p07053|pr1b_tobac : 133.0)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0035044 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0031914 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g048040.1.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT5G26130 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
GSVIVT01036997001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.02 Archaeplastida
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g12510.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 Archaeplastida
Mp6g06360.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g06810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c5_14360V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 35 91
No external refs found!