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  5. AMTR_s00030p00229610

AMTR_s00030p00229610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.182

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0001474 (Archaeplastida) Phylogenetic Tree(s): OG0001474_tree ,
OG_05_0001013 (LandPlants) Phylogenetic Tree(s): OG_05_0001013_tree ,
OG_06_0001081 (SeedPlants) Phylogenetic Tree(s): OG_06_0001081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00229610
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT2G34620 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
GSVIVT01010499001 No alias RNA biosynthesis.organelle... 0.05 Archaeplastida
LOC_Os03g57149.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Mp1g28320.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
Solyc01g109550.2.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc05g007840.3.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Zm00001e001739_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 61 320
No external refs found!