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  5. Solyc10g049365.1.1

Solyc10g049365.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 139.0)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g049365.1.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Gb_03554 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g150117.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.06 Archaeplastida
Solyc04g005015.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc06g011407.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.11 Archaeplastida
Solyc06g033955.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc07g020865.1.1 No alias No annotation 0.12 Archaeplastida
Solyc07g025095.1.1 No alias No annotation 0.06 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.02 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.03 Archaeplastida
Solyc08g065695.1.1 No alias No annotation 0.07 Archaeplastida
Solyc09g018205.1.1 No alias No annotation 0.08 Archaeplastida
Solyc10g018197.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.14 Archaeplastida
Solyc10g024387.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.03 Archaeplastida
Solyc10g150126.1.1 No alias No annotation 0.09 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.02 Archaeplastida
Solyc11g063747.1.1 No alias No annotation 0.1 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0044267 cellular protein metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!