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  5. Solyc10g049476.1.1

Solyc10g049476.1.1


Description : no hits & (original description: none)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g049476.1.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Solyc01g028985.1.1 No alias No annotation 0.03 Archaeplastida
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc03g033755.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc07g017605.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc07g017975.1.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.01 Archaeplastida
Solyc09g072757.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.33 Archaeplastida
Solyc10g046935.1.1 No alias No annotation 0.33 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.01 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!