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  5. Solyc10g049870.1.1

Solyc10g049870.1.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000387 (SeedPlants) Phylogenetic Tree(s): OG_06_0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g049870.1.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00138p00067840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G66140 ZFP4 zinc finger protein 4 0.05 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.03 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.03 Archaeplastida
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g41110.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os07g01180.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os08g44190.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_54742g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_57501g0010 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5999529g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c2_32900V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.08 Archaeplastida
Pp3c5_6880V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.01 Archaeplastida
Solyc01g107430.2.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e009853_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e017991_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!