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  5. Solyc10g051160.2.1

Solyc10g051160.2.1


Description : Putative F-box protein PP2-B12 OS=Arabidopsis thaliana (sp|q9flu7|p2b12_arath : 141.0)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g051160.2.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT4G19840 PP2-A1,... phloem protein 2-A1 0.02 Archaeplastida
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.03 Archaeplastida
GSVIVT01003897001 No alias F-box protein At2g02240 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01026408001 No alias No description available 0.01 Archaeplastida
LOC_Os02g56810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_22084g0010 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g22930.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp8g03620.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e023618_P002 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e034748_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 17 60
IPR025886 PP2-like 111 210
No external refs found!