Solyc10g051255.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 129.0)


Gene families : OG0000940 (Archaeplastida) Phylogenetic Tree(s): OG0000940_tree ,
OG_05_0000578 (LandPlants) Phylogenetic Tree(s): OG_05_0000578_tree ,
OG_06_0000281 (SeedPlants) Phylogenetic Tree(s): OG_06_0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g051255.1.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Solyc01g103045.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc02g005335.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc02g050263.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g077865.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g090397.1.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Solyc03g034394.1.1 No alias No annotation 0.05 Archaeplastida
Solyc03g082845.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc04g017625.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g053033.1.1 No alias No annotation 0.03 Archaeplastida
Solyc04g074865.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g006325.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc05g025953.1.1 No alias No annotation 0.05 Archaeplastida
Solyc05g050887.1.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Solyc05g051385.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g048943.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Solyc07g009477.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.17 Archaeplastida
Solyc07g015873.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.11 Archaeplastida
Solyc07g018027.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc07g061895.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc08g014612.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc09g042725.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc12g039205.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.01 Archaeplastida
Solyc12g042215.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Solyc12g062203.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!