1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00030p00237270

AMTR_s00030p00237270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.203

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).Lys-63-linked polyubiquitination.Ubc13-Uev1 conjugating E2 complex.Uev1 component


Gene families : OG0001273 (Archaeplastida) Phylogenetic Tree(s): OG0001273_tree ,
OG_05_0001761 (LandPlants) Phylogenetic Tree(s): OG_05_0001761_tree ,
OG_06_0001966 (SeedPlants) Phylogenetic Tree(s): OG_06_0001966_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00237270
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g12570.1 No alias component Uev1 of Ubc13-Uev1 conjugating E2 complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 44 136
No external refs found!