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  5. Solyc10g052800.1.1

Solyc10g052800.1.1


Description : NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris (sp|q36450|ndus2_nicsy : 129.0)


Gene families : OG0001064 (Archaeplastida) Phylogenetic Tree(s): OG0001064_tree ,
OG_05_0002952 (LandPlants) Phylogenetic Tree(s): OG_05_0002952_tree ,
OG_06_0005031 (SeedPlants) Phylogenetic Tree(s): OG_06_0005031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g052800.1.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00081000 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.02 Archaeplastida
AMTR_s00456p00012010 evm_27.TU.AmTr_v1... NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.02 Archaeplastida
ATCG01110 NDHH NAD(P)H dehydrogenase subunit H 0.02 Archaeplastida
Gb_28454 No alias NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.04 Archaeplastida
Smo137890 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 Archaeplastida
Solyc09g031573.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEA Interproscan
MF GO:0048038 quinone binding IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001135 NADH_Q_OxRdtase_suD 21 103
No external refs found!