Solyc10g055130.2.1


Description : component MED20 of head module of MEDIATOR transcription co-activator complex


Gene families : OG0002602 (Archaeplastida) Phylogenetic Tree(s): OG0002602_tree ,
OG_05_0002159 (LandPlants) Phylogenetic Tree(s): OG_05_0002159_tree ,
OG_06_0001877 (SeedPlants) Phylogenetic Tree(s): OG_06_0001877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g055130.2.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Solyc10g055020.3.1 No alias component MED20 of head module of MEDIATOR transcription... 0.06 Archaeplastida
Solyc10g055100.1.1 No alias component MED20 of head module of MEDIATOR transcription... 0.06 Archaeplastida
Solyc12g062270.1.1 No alias component MED20 of head module of MEDIATOR transcription... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA Interproscan
BP GO:0006357 regulation of transcription by RNA polymerase II IEA Interproscan
CC GO:0016592 mediator complex IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013921 Mediator_Med20 1 111
No external refs found!