Solyc10g055250.1.1

Description : RNA chaperone (CSP). mRNA chaperone (CSD)

Gene families : OG0001543 (Archaeplastida) Phylogenetic Tree(s): OG0001543_tree ,
OG_05_0001927 (LandPlants) Phylogenetic Tree(s): OG_05_0001927_tree ,
OG_06_0002403 (SeedPlants) Phylogenetic Tree(s): OG_06_0002403_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g055250.1.1
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01024055001	No alias	External stimuli response.temperature.Csd...	0.04	Archaeplastida
Zm00001e041725_P001	No alias	RNA chaperone (CSP). mRNA chaperone (CSD)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	117	133
IPR001878	Znf_CCHC	149	165
IPR002059	CSP_DNA-bd	12	76

External Links

No external refs found!