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  5. AMTR_s00030p00244570

AMTR_s00030p00244570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.221

Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0000092 (SeedPlants) Phylogenetic Tree(s): OG_06_0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00244570
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00187750 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00030p00243810 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
AT2G47120 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.01 Archaeplastida
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Archaeplastida
AT2G47150 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.01 Archaeplastida
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 Archaeplastida
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.03 Archaeplastida
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 Archaeplastida
GSVIVT01033916001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_05036 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Gb_05039 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.06 Archaeplastida
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_07847 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_13572 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.1 Archaeplastida
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 Archaeplastida
Gb_25236 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_32338 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 Archaeplastida
Gb_32339 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_34140 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
Gb_39606 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 Archaeplastida
Gb_40683 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os03g61740.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g10000.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g10010.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os07g46840.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.02 Archaeplastida
LOC_Os07g46846.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g46860.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10436701g0020 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
MA_289156g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_932914g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_954240g0010 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.04 Archaeplastida
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g00680.1 No alias Short-chain dehydrogenase reductase 3c OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 Archaeplastida
Smo139060 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo229892 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo79955 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g005500.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Solyc01g091660.3.1 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g018600.1.1 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g056610.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Solyc12g056700.2.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Zm00001e035437_P002 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!