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  5. Solyc10g055800.2.1

Solyc10g055800.2.1


Description : Basic 30 kDa endochitinase OS=Solanum lycopersicum (sp|q05538|chic_sollc : 494.0)


Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g055800.2.1
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.05 Archaeplastida
AMTR_s00001p00243570 evm_27.TU.AmTr_v1... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.05 Archaeplastida
AMTR_s00001p00243680 evm_27.TU.AmTr_v1... Chitinase 3 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
AMTR_s00001p00243780 evm_27.TU.AmTr_v1... Endochitinase A2 OS=Pisum sativum 0.06 Archaeplastida
AMTR_s00001p00244240 evm_27.TU.AmTr_v1... Endochitinase B OS=Nicotiana tabacum 0.03 Archaeplastida
AMTR_s00045p00134660 evm_27.TU.AmTr_v1... Chitinase 10 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00066p00199730 evm_27.TU.AmTr_v1... Endochitinase EP3 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G02360 No alias Chitinase family protein 0.02 Archaeplastida
AT2G43570 CHI chitinase, putative 0.06 Archaeplastida
AT2G43590 No alias Chitinase family protein 0.03 Archaeplastida
AT2G43600 No alias Chitinase family protein 0.04 Archaeplastida
AT2G43610 No alias Chitinase family protein 0.05 Archaeplastida
AT2G43620 No alias Chitinase family protein 0.06 Archaeplastida
AT3G16920 CTL2, ATCTL2 chitinase-like protein 2 0.02 Archaeplastida
AT3G47540 No alias Chitinase family protein 0.05 Archaeplastida
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.06 Archaeplastida
AT4G01700 No alias Chitinase family protein 0.05 Archaeplastida
GSVIVT01007190001 No alias Basic endochitinase OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01028243001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01031685001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.03 Archaeplastida
GSVIVT01035029001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.02 Archaeplastida
GSVIVT01038108001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038111001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01038120001 No alias Endochitinase EP3 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Gb_05672 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_10203 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Gb_14113 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 297.0) 0.02 Archaeplastida
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_29991 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_29994 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 88.6) 0.05 Archaeplastida
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os01g18400.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os02g39330.1 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os03g04060.1 No alias Chitinase 11 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g09390.1 No alias Lectin OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g41680.1 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g04690.1 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g33130.1 No alias Chitinase 2 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os06g51050.1 No alias Chitinase 3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os06g51060.1 No alias Chitinase 1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os10g39680.1 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.06 Archaeplastida
MA_10425967g0010 No alias Basic endochitinase OS=Vitis vinifera... 0.03 Archaeplastida
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10430424g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10431378g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
MA_10431378g0020 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_10435326g0010 No alias Endochitinase EP3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10435764g0010 No alias Chitinase-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_114934g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_170598g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_18470g0020 No alias Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.04 Archaeplastida
MA_191308g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_295712g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_3814373g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_381956g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_4343642g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_448160g0010 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_4984466g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_5970350g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_80085g0010 No alias Basic endochitinase C OS=Secale cereale... 0.03 Archaeplastida
MA_8921185g0010 No alias Basic endochitinase C OS=Secale cereale... 0.06 Archaeplastida
MA_8960362g0010 No alias Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 81.6) 0.05 Archaeplastida
MA_9682123g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
MA_9952704g0010 No alias Endochitinase OS=Phaseolus vulgaris... 0.02 Archaeplastida
Pp3c26_2880V3.1 No alias Chitinase family protein 0.02 Archaeplastida
Pp3c6_130V3.1 No alias basic chitinase 0.02 Archaeplastida
Smo446851 No alias Endochitinase A2 OS=Pisum sativum 0.03 Archaeplastida
Solyc02g061770.4.1 No alias Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc02g082930.3.1 No alias Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.06 Archaeplastida
Solyc10g074440.2.1 No alias Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.03 Archaeplastida
Zm00001e002252_P001 No alias Chitinase 8 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e015056_P001 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e027534_P001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e030152_P001 No alias Basic endochitinase A OS=Secale cereale... 0.05 Archaeplastida
Zm00001e041138_P001 No alias Endochitinase B (Fragment) OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004061 arylformamidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0009439 cyanate metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 82 314
IPR001002 Chitin-bd_1 21 59
No external refs found!