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  5. Solyc10g078300.2.1

Solyc10g078300.2.1


Description : no hits & (original description: none)


Gene families : OG0002199 (Archaeplastida) Phylogenetic Tree(s): OG0002199_tree ,
OG_05_0001755 (LandPlants) Phylogenetic Tree(s): OG_05_0001755_tree ,
OG_06_0007912 (SeedPlants) Phylogenetic Tree(s): OG_06_0007912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g078300.2.1

Target Alias Description ECC score Gene Family Method Actions
AT3G56680 No alias Single-stranded nucleic acid binding R3H protein 0.03 Archaeplastida
GSVIVT01011273001 No alias No description available 0.02 Archaeplastida
GSVIVT01025786001 No alias No description available 0.01 Archaeplastida
Zm00001e033627_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001374 R3H_dom 28 77
IPR024771 SUZ 117 163
No external refs found!