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  5. Solyc10g078970.1.1

Solyc10g078970.1.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g078970.1.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.04 Archaeplastida
AT1G66140 ZFP4 zinc finger protein 4 0.03 Archaeplastida
AT1G68480 JAG C2H2 and C2HC zinc fingers superfamily protein 0.07 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.03 Archaeplastida
AT2G37740 ZFP10, ATZFP10 zinc-finger protein 10 0.04 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.04 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.04 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G14010 KNU C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_12546 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Gb_26860 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g53530.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g20930.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g089590.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e009854_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!