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  5. Solyc10g079400.3.1

Solyc10g079400.3.1


Description : villin actin-crosslinking factor


Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0014576 (SeedPlants) Phylogenetic Tree(s): OG_06_0014576_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g079400.3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT2G41740 ATVLN2, VLN2 villin 2 0.03 Archaeplastida
AT5G57320 VLN5 villin, putative 0.05 Archaeplastida
Cre12.g524400 No alias No description available 0.01 Archaeplastida
Cre12.g555550 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
GSVIVT01029237001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
Gb_29107 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Gb_31397 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Gb_40777 No alias villin actin-crosslinking factor 0.04 Archaeplastida
LOC_Os04g51440.1 No alias villin actin-crosslinking factor 0.07 Archaeplastida
LOC_Os05g06110.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
MA_9118625g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g24640.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Zm00001e001712_P002 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e007033_P001 No alias villin actin-crosslinking factor 0.09 Archaeplastida
Zm00001e018617_P001 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e038175_P001 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e041587_P002 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 350 428
IPR007123 Gelsolin-like_dom 581 657
IPR007123 Gelsolin-like_dom 18 100
IPR007123 Gelsolin-like_dom 477 546
IPR007123 Gelsolin-like_dom 154 207
IPR007123 Gelsolin-like_dom 269 311
IPR003128 Villin_headpiece 840 875
No external refs found!