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  5. Solyc10g080100.3.1

Solyc10g080100.3.1


Description : villin actin-crosslinking factor


Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0004024 (SeedPlants) Phylogenetic Tree(s): OG_06_0004024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g080100.3.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT2G41740 ATVLN2, VLN2 villin 2 0.05 Archaeplastida
AT5G57320 VLN5 villin, putative 0.02 Archaeplastida
Cre12.g555550 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
GSVIVT01029237001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
GSVIVT01033261001 No alias Cytoskeleton.microfilament network.actin... 0.01 Archaeplastida
Gb_23117 No alias villin actin-crosslinking factor 0.01 Archaeplastida
LOC_Os04g51440.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Mp7g09750.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Solyc02g021420.3.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Solyc04g015830.3.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e001712_P002 No alias villin actin-crosslinking factor 0.01 Archaeplastida
Zm00001e010507_P006 No alias villin actin-crosslinking factor 0.05 Archaeplastida
Zm00001e018617_P001 No alias villin actin-crosslinking factor 0.01 Archaeplastida
Zm00001e028314_P001 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Zm00001e038175_P001 No alias villin actin-crosslinking factor 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 910 945
IPR007123 Gelsolin-like_dom 531 600
IPR007123 Gelsolin-like_dom 29 111
IPR007123 Gelsolin-like_dom 412 482
IPR007123 Gelsolin-like_dom 265 337
IPR007123 Gelsolin-like_dom 149 217
IPR007123 Gelsolin-like_dom 635 710
No external refs found!