Solyc10g080880.2.1

Description : auxin transporter (PIN). auxin efflux transporter (PIN)

Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g080880.2.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G73590	ATPIN1, PIN1	Auxin efflux carrier family protein	0.02	Archaeplastida
AT2G01420	ATPIN4, PIN4	Auxin efflux carrier family protein	0.01	Archaeplastida
Gb_03018	No alias	no hits & (original description: none)	0.01	Archaeplastida
Gb_06199	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.03	Archaeplastida
LOC_Os01g45550.1	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.02	Archaeplastida
LOC_Os11g04190.1	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.01	Archaeplastida
LOC_Os12g04000.1	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.01	Archaeplastida
MA_61553g0010	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.02	Archaeplastida
MA_61553g0020	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.02	Archaeplastida
Pp3c23_10200V3.1	No alias	Auxin efflux carrier family protein	0.02	Archaeplastida
Solyc01g068410.4.1	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.05	Archaeplastida
Zm00001e024071_P002	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.01	Archaeplastida
Zm00001e036414_P001	No alias	auxin transporter (PIN). auxin efflux transporter (PIN)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004776	Mem_trans	9	581

External Links

No external refs found!