1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g083240.2.1

Solyc10g083240.2.1


Description : Small RNA-binding protein 11, chloroplastic OS=Arabidopsis thaliana (sp|q9ffz6|rbp11_arath : 154.0)


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0001165 (LandPlants) Phylogenetic Tree(s): OG_05_0001165_tree ,
OG_06_0000918 (SeedPlants) Phylogenetic Tree(s): OG_06_0000918_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g083240.2.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.03 Archaeplastida
AT5G19030 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Archaeplastida
Cre02.g079400 No alias No description available 0.02 Archaeplastida
Smo140819 No alias RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
Zm00001e001247_P001 No alias Organelle RRM domain-containing protein 2, mitochondrial... 0.03 Archaeplastida
Zm00001e008185_P001 No alias Small RNA-binding protein 11, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Neighborhood
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 33 102
No external refs found!