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  5. Solyc10g083250.2.1

Solyc10g083250.2.1


Description : Casparian strip membrane protein 1 OS=Nicotiana tabacum (sp|p0di50|casp1_tobac : 266.0)


Gene families : OG0000389 (Archaeplastida) Phylogenetic Tree(s): OG0000389_tree ,
OG_05_0000192 (LandPlants) Phylogenetic Tree(s): OG_05_0000192_tree ,
OG_06_0001302 (SeedPlants) Phylogenetic Tree(s): OG_06_0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g083250.2.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.05 Archaeplastida
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.04 Archaeplastida
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.04 Archaeplastida
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.04 Archaeplastida
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.04 Archaeplastida
AMTR_s00067p00068460 evm_27.TU.AmTr_v1... Casparian strip membrane protein 1 OS=Malus domestica 0.04 Archaeplastida
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.03 Archaeplastida
AT1G03700 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT1G14160 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT2G27370 No alias Uncharacterised protein family (UPF0497) 0.08 Archaeplastida
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.12 Archaeplastida
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT3G11550 No alias Uncharacterised protein family (UPF0497) 0.12 Archaeplastida
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.05 Archaeplastida
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.12 Archaeplastida
AT5G15290 No alias Uncharacterised protein family (UPF0497) 0.06 Archaeplastida
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
GSVIVT01008618001 No alias CASP-like protein 1F1 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.05 Archaeplastida
GSVIVT01036085001 No alias Casparian strip membrane protein 2 OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.05 Archaeplastida
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
Gb_11697 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 Archaeplastida
Gb_12158 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_12159 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 Archaeplastida
Gb_26811 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 Archaeplastida
Gb_40899 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 Archaeplastida
LOC_Os01g13560.1 No alias CASP-like protein 1C1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g36845.1 No alias Casparian strip membrane protein 7 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os02g51010.1 No alias Casparian strip membrane protein 4 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os04g38690.1 No alias Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.08 Archaeplastida
LOC_Os04g58760.1 No alias Casparian strip membrane protein 1 OS=Oryza sativa... 0.06 Archaeplastida
LOC_Os05g15630.1 No alias CASP-like protein BLE3 OS=Oryza sativa subsp. indica... 0.05 Archaeplastida
LOC_Os06g12500.1 No alias Casparian strip membrane protein 3 OS=Oryza sativa... 0.07 Archaeplastida
LOC_Os08g01160.1 No alias Casparian strip membrane protein 2 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os12g41690.1 No alias CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_1041g0010 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.03 Archaeplastida
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 Archaeplastida
MA_3155878g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.05 Archaeplastida
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.09 Archaeplastida
MA_652592g0010 No alias No annotation 0.02 Archaeplastida
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.07 Archaeplastida
MA_94788g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 Archaeplastida
Mp3g20970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c10_17030V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Pp3c12_23940V3.1 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
Pp3c14_2270V3.1 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
Pp3c4_1550V3.1 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
Solyc02g069730.3.1 No alias CASP-like protein 1B1 OS=Ricinus communis... 0.04 Archaeplastida
Solyc03g097720.4.1 No alias CASP-like protein 1F1 OS=Vitis vinifera... 0.05 Archaeplastida
Solyc03g097730.2.1 No alias CASP-like protein 1F1 OS=Ricinus communis... 0.05 Archaeplastida
Solyc06g072550.3.1 No alias CASP-like protein 1F1 OS=Vitis vinifera... 0.02 Archaeplastida
Zm00001e006491_P001 No alias Casparian strip membrane protein 2 OS=Zea mays... 0.06 Archaeplastida
Zm00001e015806_P001 No alias Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.08 Archaeplastida
Zm00001e024279_P001 No alias Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.07 Archaeplastida
Zm00001e026902_P001 No alias CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.06 Archaeplastida
Zm00001e036094_P001 No alias Casparian strip membrane protein 1 OS=Zea mays... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 49 197
No external refs found!