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  5. Solyc10g083730.2.1

Solyc10g083730.2.1


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000968 (SeedPlants) Phylogenetic Tree(s): OG_06_0000968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g083730.2.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G80110 ATPP2-B11, PP2-B11 phloem protein 2-B11 0.03 Archaeplastida
AT2G02300 PP2-B5, AtPP2-B5 phloem protein 2-B5 0.03 Archaeplastida
AT3G61060 AtPP2-A13, PP2-A13 phloem protein 2-A13 0.02 Archaeplastida
AT5G52120 PP2-A14, AtPP2-A14 phloem protein 2-A14 0.04 Archaeplastida
GSVIVT01010614001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os02g56820.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g05480.1 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g01690.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c19_22630V3.1 No alias phloem protein 2-A15 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 114 283
No external refs found!