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  5. Solyc10g084370.3.1

Solyc10g084370.3.1


Description : transcription factor (MYB-related). REVEILLE circadian clock factor


Gene families : OG0000637 (Archaeplastida) Phylogenetic Tree(s): OG0000637_tree ,
OG_05_0000630 (LandPlants) Phylogenetic Tree(s): OG_05_0000630_tree ,
OG_06_0000581 (SeedPlants) Phylogenetic Tree(s): OG_06_0000581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g084370.3.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00072910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AT1G01520 No alias Homeodomain-like superfamily protein 0.08 Archaeplastida
AT3G09600 No alias Homeodomain-like superfamily protein 0.1 Archaeplastida
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.12 Archaeplastida
AT5G37260 RVE2, CIR1 Homeodomain-like superfamily protein 0.03 Archaeplastida
Cre06.g275350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027456001 No alias Multi-process regulation.circadian clock.core oscillator... 0.14 Archaeplastida
GSVIVT01035231001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
LOC_Os02g45670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 Archaeplastida
LOC_Os06g01670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 Archaeplastida
LOC_Os06g51260.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 Archaeplastida
Pp3c3_33220V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo78045 No alias Multi-process regulation.circadian clock.evening element... 0.04 Archaeplastida
Zm00001e013333_P002 No alias transcription factor (MYB-related) 0.15 Archaeplastida
Zm00001e023232_P002 No alias transcription factor (MYB-related). REVEILLE circadian... 0.05 Archaeplastida
Zm00001e041379_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 35 79
No external refs found!