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  5. Solyc10g084780.3.1

Solyc10g084780.3.1


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0009548 (LandPlants) Phylogenetic Tree(s): OG_05_0009548_tree ,
OG_06_0012413 (SeedPlants) Phylogenetic Tree(s): OG_06_0012413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g084780.3.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00022p00153780 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00044p00061510 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
AMTR_s00168p00074090 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.04 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.07 Archaeplastida
AT1G26770 ATEXPA10,... expansin A10 0.03 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.05 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.09 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.1 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.05 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.07 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.07 Archaeplastida
AT4G38210 ATEXPA20,... expansin A20 0.06 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.07 Archaeplastida
AT5G05290 EXPA2, ATHEXP... expansin A2 0.04 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.04 Archaeplastida
AT5G39280 ATHEXP ALPHA ... expansin A23 0.05 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.04 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.13 Archaeplastida
GSVIVT01000214001 No alias Phytohormones.signalling peptides.NCRP... 0.03 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01014362001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01024946001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01035233001 No alias Expansin-A13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.04 Archaeplastida
Gb_01501 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.04 Archaeplastida
Gb_01504 No alias alpha-class expansin 0.04 Archaeplastida
Gb_01505 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_04404 No alias alpha-class expansin 0.03 Archaeplastida
Gb_06127 No alias alpha-class expansin 0.06 Archaeplastida
Gb_06139 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07436 No alias Expansin-A4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.02 Archaeplastida
Gb_27617 No alias Putative expansin-A17 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28036 No alias Expansin-A29 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_34121 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os01g60770.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16730.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.07 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g60720.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os06g50400.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_104065g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10429288g0020 No alias Expansin-A2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.08 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_200461g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_651027g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09650.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09750.1 No alias alpha-class expansin 0.01 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.04 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c13_8440V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.07 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.04 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.03 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_13470V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.04 Archaeplastida
Smo102623 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo410512 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.03 Archaeplastida
Solyc03g115270.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc06g051800.3.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.07 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.04 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011741_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014220_P001 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e014221_P001 No alias Expansin-A22 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.09 Archaeplastida
Zm00001e019433_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e040578_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e041376_P001 No alias alpha-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 30 107
No external refs found!