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  5. Solyc10g085070.3.1

Solyc10g085070.3.1


Description : no description available(sp|q9ss80|ops_arath : 275.0)


Gene families : OG0007118 (Archaeplastida) Phylogenetic Tree(s): OG0007118_tree ,
OG_05_0005103 (LandPlants) Phylogenetic Tree(s): OG_05_0005103_tree ,
OG_06_0003180 (SeedPlants) Phylogenetic Tree(s): OG_06_0003180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g085070.3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00213140 evm_27.TU.AmTr_v1... UPF0503 protein At3g09070, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G09070 No alias Protein of unknown function (DUF740) 0.06 Archaeplastida
AT5G01170 No alias Protein of unknown function (DUF740) 0.05 Archaeplastida
GSVIVT01034008001 No alias No description available 0.05 Archaeplastida
LOC_Os01g63310.1 No alias no description available(sp|q9lfb9|opsl1_arath : 112.0) 0.04 Archaeplastida
LOC_Os05g37800.1 No alias no description available(sp|q9lfb9|opsl1_arath : 113.0) 0.04 Archaeplastida
Zm00001e019256_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e026949_P001 No alias no description available(sp|q9ss80|ops_arath : 80.1) 0.08 Archaeplastida
Zm00001e028737_P001 No alias no description available(sp|q9ss80|ops_arath : 130.0) 0.09 Archaeplastida
Zm00001e031736_P001 No alias no description available(sp|q9ss80|ops_arath : 142.0) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008004 UPF0503 15 560
No external refs found!