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  5. Solyc10g085490.3.1

Solyc10g085490.3.1


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000968 (SeedPlants) Phylogenetic Tree(s): OG_06_0000968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g085490.3.1
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00139470 evm_27.TU.AmTr_v1... F-box protein At2g02240 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00069p00115850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os04g48270.3 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
MA_10430103g0010 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10437012g0010 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_5038g0010 No alias F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e040260_P002 No alias Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025886 PP2-like 113 283
No external refs found!