Solyc10g086440.2.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086440.2.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.11 Archaeplastida
AT1G21340 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.09 Archaeplastida
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.05 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.06 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.14 Archaeplastida
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.08 Archaeplastida
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.08 Archaeplastida
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
GSVIVT01002242001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01007758001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01019969001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01025119001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.1 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_09675 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_12877 No alias transcription factor (DOF) 0.04 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_20867 No alias Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g55340.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g64590.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g49440.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.11 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os10g35300.2 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_248613g0010 No alias No annotation 0.05 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_83624g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_939289g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Pp3c13_2000V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.02 Archaeplastida
Pp3c17_7930V3.1 No alias cycling DOF factor 2 0.03 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Smo29617 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e001988_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e006527_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.1 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.12 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.09 Archaeplastida
Zm00001e015701_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e018163_P001 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.09 Archaeplastida
Zm00001e023334_P001 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e023435_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.08 Archaeplastida
Zm00001e029641_P001 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e038479_P002 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 86 141
No external refs found!