1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g150150.1.1

Solyc10g150150.1.1


Description : Zerumbone synthase OS=Zingiber zerumbet (sp|f1swa0|zersy_zinze : 144.0)


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0009124 (LandPlants) Phylogenetic Tree(s): OG_05_0009124_tree ,
OG_06_0000092 (SeedPlants) Phylogenetic Tree(s): OG_06_0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g150150.1.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253880 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00030p00244080 evm_27.TU.AmTr_v1... Tropinone reductase-like 1 OS=Erythroxylum coca 0.02 Archaeplastida
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.04 Archaeplastida
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_32313 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
LOC_Os12g16010.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 Archaeplastida
Solyc01g091660.3.1 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e035437_P002 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 23 154
No external refs found!