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  5. Solyc11g005230.1.1

Solyc11g005230.1.1


Description : Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana (sp|q8gwz6|srr1_arath : 130.0)


Gene families : OG0002446 (Archaeplastida) Phylogenetic Tree(s): OG0002446_tree ,
OG_05_0002226 (LandPlants) Phylogenetic Tree(s): OG_05_0002226_tree ,
OG_06_0001838 (SeedPlants) Phylogenetic Tree(s): OG_06_0001838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g005230.1.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.14 No alias Protein SENSITIVITY TO RED LIGHT REDUCED 1... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051321 meiotic cell cycle IEP Neighborhood
InterPro domains Description Start Stop
IPR012942 SRR1-like 68 121
IPR002156 RNaseH_domain 300 413
No external refs found!