Solyc11g005330.2.1
Description : actin filament protein
Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc11g005330.2.1 | |
| Cluster | HCCA: Cluster_284 |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00131p00109910 | evm_27.TU.AmTr_v1... | Cytoskeleton.microfilament network.actin filament protein | 0.06 | Archaeplastida | |
| AT5G09810 | ACT7 | actin 7 | 0.09 | Archaeplastida | |
| Cpa|evm.model.tig00000319.25 | No alias | Cytoskeleton.microfilament network.actin filament protein | 0.01 | Archaeplastida | |
| GSVIVT01003099001 | No alias | Actin-1 OS=Oryza sativa subsp. indica | 0.02 | Archaeplastida | |
| GSVIVT01026580001 | No alias | Cytoskeleton.microfilament network.actin filament protein | 0.05 | Archaeplastida | |
| Gb_22033 | No alias | actin filament protein | 0.02 | Archaeplastida | |
| Gb_24792 | No alias | actin filament protein | 0.03 | Archaeplastida | |
| LOC_Os12g44350.1 | No alias | actin filament protein | 0.02 | Archaeplastida | |
| Mp6g10990.1 | No alias | actin filament protein | 0.03 | Archaeplastida | |
| Mp6g11010.1 | No alias | actin filament protein | 0.03 | Archaeplastida | |
| Mpzg00230.1 | No alias | actin filament protein | 0.03 | Archaeplastida | |
| Pp3c10_17080V3.1 | No alias | actin 7 | 0.09 | Archaeplastida | |
| Pp3c12_24710V3.1 | No alias | actin 7 | 0.06 | Archaeplastida | |
| Pp3c12_24760V3.1 | No alias | actin 7 | 0.02 | Archaeplastida | |
| Pp3c3_33410V3.1 | No alias | actin 7 | 0.07 | Archaeplastida | |
| Pp3c3_33440V3.1 | No alias | actin 7 | 0.06 | Archaeplastida | |
| Solyc10g086460.2.1 | No alias | actin filament protein | 0.04 | Archaeplastida | |
| Zm00001e027663_P005 | No alias | actin filament protein | 0.06 | Archaeplastida | |
| Zm00001e029682_P001 | No alias | actin filament protein | 0.08 | Archaeplastida | |
| Zm00001e029684_P001 | No alias | actin filament protein | 0.09 | Archaeplastida |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
| MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005525 | GTP binding | IEP | Neighborhood |
| CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004000 | Actin | 5 | 377 |
External Links
| No external refs found! |