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  5. Solyc11g005700.1.1

Solyc11g005700.1.1


Description : E3 ubiquitin ligase (PUB)


Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree ,
OG_05_0000097 (LandPlants) Phylogenetic Tree(s): OG_05_0000097_tree ,
OG_06_0004101 (SeedPlants) Phylogenetic Tree(s): OG_06_0004101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g005700.1.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00199950 evm_27.TU.AmTr_v1... U-box domain-containing protein 31 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00030p00159240 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00069p00038840 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G18710 PUB29, ATPUB29 plant U-box 29 0.05 Archaeplastida
AT3G52450 PUB22 plant U-box 22 0.03 Archaeplastida
Cre10.g444100 No alias Putative U-box domain-containing protein 55... 0.02 Archaeplastida
Gb_02633 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os04g34140.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
LOC_Os08g04470.1 No alias U-box domain-containing protein 8 OS=Arabidopsis... 0.04 Archaeplastida
MA_126399g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 Archaeplastida
MA_8837995g0010 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.03 Archaeplastida
MA_95662g0020 No alias U-box domain-containing protein 27 OS=Arabidopsis... 0.03 Archaeplastida
Mp3g01700.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c3_32490V3.1 No alias plant U-box 26 0.05 Archaeplastida
Zm00001e007109_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e014752_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e038657_P001 No alias U-box domain-containing protein 75 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e040854_P001 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 10 79
No external refs found!