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  5. Solyc11g006260.2.1

Solyc11g006260.2.1


Description : defensin (PDF2)


Gene families : OG0001480 (Archaeplastida) Phylogenetic Tree(s): OG0001480_tree ,
OG_05_0000951 (LandPlants) Phylogenetic Tree(s): OG_05_0000951_tree ,
OG_06_0000613 (SeedPlants) Phylogenetic Tree(s): OG_06_0000613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006260.2.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G61070 PDF2.4, LCR66 low-molecular-weight cysteine-rich 66 0.03 Archaeplastida
AT2G02100 LCR69, PDF2.2 low-molecular-weight cysteine-rich 69 0.04 Archaeplastida
AT2G02120 PDF2.1, LCR70 Scorpion toxin-like knottin superfamily protein 0.06 Archaeplastida
AT2G02140 PDF2.6, LCR72 low-molecular-weight cysteine-rich 72 0.05 Archaeplastida
AT2G31953 LCR76 low-molecular-weight cysteine-rich 76 0.05 Archaeplastida
AT5G63660 LCR74, PDF2.5 Scorpion toxin-like knottin superfamily protein 0.06 Archaeplastida
GSVIVT01010274001 No alias Defensin-like protein OS=Petunia integrifolia 0.05 Archaeplastida
LOC_Os04g11130.1 No alias defensin (PDF2) 0.02 Archaeplastida
LOC_Os04g44130.1 No alias defensin (PDF2) 0.03 Archaeplastida
MA_132614g0010 No alias defensin (PDF2) 0.02 Archaeplastida
MA_45256g0010 No alias defensin (PDF2) 0.02 Archaeplastida
Solyc07g007730.4.1 No alias defensin (PDF2) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!