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  5. Solyc11g006520.2.1

Solyc11g006520.2.1


Description : Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum (sp|q6l3z4|r1b12_solde : 288.0)


Gene families : OG0002721 (Archaeplastida) Phylogenetic Tree(s): OG0002721_tree ,
OG_05_0001818 (LandPlants) Phylogenetic Tree(s): OG_05_0001818_tree ,
OG_06_0000911 (SeedPlants) Phylogenetic Tree(s): OG_06_0000911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006520.2.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Solyc01g087200.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.07 Archaeplastida
Solyc08g005500.4.1 No alias Putative late blight resistance protein homolog R1A-6... 0.04 Archaeplastida
Solyc08g074250.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.06 Archaeplastida
Solyc11g006530.3.1 No alias Putative late blight resistance protein homolog R1B-17... 0.05 Archaeplastida
Solyc11g006630.1.1 No alias Putative late blight resistance protein homolog R1B-12... 0.07 Archaeplastida
Solyc12g017800.3.1 No alias Putative late blight resistance protein homolog R1B-12... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 150 294
IPR002182 NB-ARC 296 364
No external refs found!