Solyc11g006630.1.1

Description : Putative late blight resistance protein homolog R1B-12 OS=Solanum demissum (sp|q6l3z4|r1b12_solde : 320.0)

Gene families : OG0002721 (Archaeplastida) Phylogenetic Tree(s): OG0002721_tree ,
OG_05_0001818 (LandPlants) Phylogenetic Tree(s): OG_05_0001818_tree ,
OG_06_0000911 (SeedPlants) Phylogenetic Tree(s): OG_06_0000911_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g006630.1.1
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
Solyc04g011960.2.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.05	Archaeplastida
Solyc04g011980.1.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.05	Archaeplastida
Solyc04g011990.3.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.06	Archaeplastida
Solyc05g008070.4.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.04	Archaeplastida
Solyc06g062440.4.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.05	Archaeplastida
Solyc07g049700.1.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.02	Archaeplastida
Solyc08g005500.4.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.07	Archaeplastida
Solyc10g008230.3.1	No alias	Putative late blight resistance protein homolog R1B-14...	0.04	Archaeplastida
Solyc10g008240.3.1	No alias	Putative late blight resistance protein homolog R1B-12...	0.04	Archaeplastida
Solyc11g006520.2.1	No alias	Putative late blight resistance protein homolog R1B-12...	0.07	Archaeplastida
Solyc11g069020.3.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.04	Archaeplastida
Solyc12g009450.3.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	154	399

External Links

No external refs found!