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  5. Solyc11g006740.3.1

Solyc11g006740.3.1


Description : no hits & (original description: none)


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g006740.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.03 Archaeplastida
AT2G02340 AtPP2-B8, PP2-B8 phloem protein 2-B8 0.02 Archaeplastida
AT3G53000 PP2-A15, AtPP2-A15 phloem protein 2-A15 0.02 Archaeplastida
GSVIVT01003900001 No alias F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01019854001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os04g48270.3 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
MA_10430103g0010 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10434357g0020 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_227118g0010 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g044930.3.1 No alias F-box protein At2g02240 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e041427_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!